Deep-learning prediction of gene expression from personal genomes

Drusinsky S, Whalen S, Pollard KS. Deep-learning prediction of gene expression from personal genomes. bioRxiv. 2024.  doi: 10.1101/2024.07.27.605449

‍

Cellular behavior analysis from live-cell imaging of TCR T cell-cancer cell interactions

Verma A, Yu C, Bachl S, Lopez I, Schwartz M, Moen E, Kale N, Ching C, Miller G, Dougherty T, Pao E, Graf W, Ward C, Jena S, Marson A, Carnevale J, Van Valen D, Engelhardt BE. Cellular behavior analysis from live-cell imaging of TCR T cell-cancer cell interactions. bioRxiv [Preprint]. 2024 Nov 21:2024.11.19.624390. doi: 10.1101/2024.11.19.624390. PMID: 39605616; PMCID: PMC11601648.

Quantized multi-task learning for context-specific representations of gene network dynamics

Han Chen, Madhavan S. Venkatesh, Javier Gómez Ortega, Siddharth V. Mahesh, Tarak N. Nandi, Ravi K. Madduri, Karin Pelka, Christina V. TheodorisbioRxiv 2024.08.16.608180; doi: https://doi.org/10.1101/2024.08.16.608180