Publications
We believe in the power of open science to drive innovation and foster collaboration. Here are the published papers from our funded researchers.
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The following publications report findings from projects funded by the Biswas Family Foundation.
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes
International Retrospective Observational Study of Continual Learning for AI on Endotracheal Tube Placement from Chest Radiographs
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Greater Than the Sum of Its Parts: Building Substructure into Protein Encoding Models
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
CONCERT Predicts Niche-Aware Perturbation Responses in Spatial Transcriptomics
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Generalizable AI Predicts Immunotherapy Outcomes Across Cancers and Treatments
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Combinatorial Prediction of Therapeutic Perturbations Using Causally Inspired Neural Networks
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Manolis Kellis, PhD, Professor of Computer Science, Massachusetts Institute of Technology
Manolis Kellis, PhD, Professor of Computer Science, Massachusetts Institute of Technology
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ReXVQA: A Large-Scale Visual Question Answering Benchmark for Generalist Chest X-Ray Understanding
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ReXGradient-160K: A Large-Scale Publicly Available Dataset of Chest Radiographs with Free-Text Reports
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Neighborhood Nonnegative Matrix Factorization Identifies Patterns and Spatially-Variable Genes in Large-Scale Spatial Transcriptomics Data
Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes
Machine Learning-Predicted Chromatin Organization Landscape Across Pediatric Tumors
Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Multimodal AI Predicts Clinical Outcomes of Drug Combinations from Preclinical Data
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Manolis Kellis, PhD, Professor of Computer Science, Massachusetts Institute of Technology
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Cellular Behavior Analysis from Live-Cell Imaging of TCR T Cell-Cancer Cell Interactions
Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Signals in the Cells: Multimodal and Contextualized Machine Learning Foundations for Therapeutics
Manolis Kellis, PhD, Professor of Computer Science, Massachusetts Institute of Technology
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ReXamine-Global: A Framework for Uncovering Inconsistencies in Radiology Report Generation Metrics
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Quantized Multi-Task Learning for Context-Specific Representations of Gene Network Dynamics
Katherine Pollard, PhD, Director of Data Science & Biotechnology, Gladstone Institutes
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
Knowledge Graph Based Agent for Complex, Knowledge-Intensive QA in Medicine
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
MAIDA-ICU
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ReXGradient-160K: A Large-Scale Publicly Available Dataset of Chest Radiographs with Free-Text Reports
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
ReXVQA
Pranav Rajpurkar, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
TxAgent
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
KGARevion
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
PINNACLE
Marinka Zitnik, PhD, Assistant Professor of Biomedical Informatics, Harvard Medical School
TDC
Manolis Kellis, PhD, Professor of Computer Science, Massachusetts Institute of Technology
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